3 Jun 9:00 am 12:00 pmThis course provides you with essential knowledge and skills to effectively prepare data for analysis. Starting with an overview of the Data Analytics pipeline and processes, the course explores various statistical and visualization techniques used in Exploratory and Descriptive Analytics to understand historical data. You will then delve into the art of Data Preparation, gaining expertise in data cleaning, handling missing values, detecting, and handling outliers, as well as transforming and engineering features. By the end of the course, you will be equipped with the necessary tools to ensure data quality and integrity, enabling you to make informed decisions and derive valuable insights from their data. Level: Introductory Length: 3 Hours Format: Lecture + Hands-on Prerequisites: Basic Python (part of the 2024 Compute Ontario Summer School) Virtual | COSS2024![Show in Google map](https://www.scinethpc.ca/wp-content/plugins/amr-ical-events-list/images/map_16.png) |
3 Jun 9:00 am 12:00 pmRunning programs on the supercomputers is done via the BASH shell. This course is two three hour live demos on using bash. No prior familiarity with bash is assumed. In addition to the basics of getting around, globbing, regular expressions, redirection, pipes, and scripting will be covered. A series of exercises are required to be done in order to complete the course. Level: Introductory Length: Two 3-Hour Sessions Format: Lecture + Hands-on Prerequisites: None (part of the 2024 Compute Ontario Summer School) Virtual | COSS2024![Show in Google map](https://www.scinethpc.ca/wp-content/plugins/amr-ical-events-list/images/map_16.png) |
3 Jun 1:30 pm 4:30 pmRunning programs on the supercomputers is done via the BASH shell. This course is two three hour live demos on using bash. No prior familiarity with bash is assumed. In addition to the basics of getting around, globbing, regular expressions, redirection, pipes, and scripting will be covered. A series of exercises are required to be done in order to complete the course. Level: Introductory Length: Two 3-Hour Sessions Format: Lecture + Hands-on Prerequisites: None (part of the 2024 Compute Ontario Summer School) Virtual | COSS2024![Show in Google map](https://www.scinethpc.ca/wp-content/plugins/amr-ical-events-list/images/map_16.png) |
3 Jun 1:30 pm 4:30 pmBe aware. Stay secure. Join us to learn more about the tools you can use to prevent the theft of your data and possibly of your identity. Other topics of discussion will include common hacking attempts, how to recognize them, and how to avoid having your data compromised, stolen, or destroyed. We will also talk about data encryption and provide tips for when travelling with electronic devices. Level: Introductory Length: 3 hours Format: Lecture Prerequisites: None (part of the 2024 Compute Ontario Summer School) Virtual | COSS2024![Show in Google map](https://www.scinethpc.ca/wp-content/plugins/amr-ical-events-list/images/map_16.png) |
21 Jun 9:00 am 12:00 pmBioinformatics, the interdisciplinary field at the intersection of biology and computational science, has revolutionized our understanding of life processes. In this one-day course, we will first tune your HPC knowledge/skills towards bioinformatics computing. Then a typical metagenomics pipeline will be explored to introduce common tools used in bioinformatic analysis and to show how they can be run in an HPC environment. Join us for an immersive day of hands-on exploration in the captivating world of bioinformatics and metagenomics! Level: Introductory Length: Two 3-Hour Sessions Format: Lecture + Hands-on Prerequisites: Alliance Account Basic understanding of biology and familiarity with Unix shells (e.g. bash, zsh, etc.). (part of the 2024 Compute Ontario Summer School) Virtual | COSS2024![Show in Google map](https://www.scinethpc.ca/wp-content/plugins/amr-ical-events-list/images/map_16.png) |
21 Jun 9:00 am 12:00 pmRNA-Seq refers to high throughput sequencing methods that probes the entire transcriptomic landscape of a given tissue or sample of interest. The data acquired from such experiments can be used to explore the overall RNA profile of a sample as well as comparing samples under various conditions. While extremely powerful, RNA-Seq is susceptible to numerous experimental pitfalls and requires intimate knowledge of the experimental procedures and data analysis methods. When conducted properly RNA-Seq can reveal information about gene/transcript expression, splicing and the effects of mutations. In this session we will take a thorough look at a comprehensive RNA-Seq pipeline, from sample processing methods to final differential expression analysis. Relevant R / BioConductor packages will be introduced. We will have the opportunity to investigate numerous quality control metrics, perform genomic alignment, differential expression and pathway enrichment analysis. We will cover several “gotcha”s and common mistakes in experimental design and data analysis. Basic familiarity with R and Linux command line will be beneficial but not required. All necessary commands and parameters will be explained du , storing, and retrieving information with remarkable precision. Whether you're a technical professional or just beginning to explore data management, the journey into the realm of databases is both enlightening and rewarding, offering endless opportunities for discovery and innovation. Together, we will explore the secrets that make our connected world tick. Level: Introductory Length: Four 3-Hour Sessions (2 Days) Format: Lecture+Hands-on Prerequisites: Basic programming knowledge Installation of MySQL on one's personal computer (part of the 2024 Compute Ontario Summer School) In our digitally-driven world, databases are the cornerstone of virtually every online service and application. They help store your favourite songs on music platforms, track orders on shopping sites, and keep your personal information safe and sound. These incredible systems are the backbone of our digital universe, silently and efficiently managing the vast oceans of data that flow through our daily lives. From the social media sites we share with our friends to the online transactions that make our lives easier, databases are the unsung heroes, diligently organizing, storing, and retrieving information with remarkable precision. Whether you're a technical professional or just beginning to explore data management, the journey into the realm of databases is both enlightening and rewarding, offering endless opportunities for discovery and innovation. Together, we will explore the secrets that make our connected world tick. Level: Introductory Length: Four 3-Hour Sessions (2 Days) Format: Lecture+Hands-on Prerequisites: Basic programming knowledge Installation of MySQL on one's personal computer (part of the 2024 Compute Ontario Summer School) Virtual | COSS2024![Show in Google map](https://www.scinethpc.ca/wp-content/plugins/amr-ical-events-list/images/map_16.png) |
21 Jun 1:30 pm 4:30 pmIn our digitally-driven world, databases are the cornerstone of virtually every online service and application. They help store your favourite songs on music platforms, track orders on shopping sites, and keep your personal information safe and sound. These incredible systems are the backbone of our digital universe, silently and efficiently managing the vast oceans of data that flow through our daily lives. From the social media sites we share with our friends to the online transactions that make our lives easier, databases are the unsung heroes, diligently organizing, storing, and retrieving information with remarkable precision. Whether you're a technical professional or just beginning to explore data management, the journey into the realm of databases is both enlightening and rewarding, offering endless opportunities for discovery and innovation. Together, we will explore the secrets that make our connected world tick. Level: Introductory Length: Four 3-Hour Sessions (2 Days) Format: Lecture+Hands-on Prerequisites: Basic programming knowledge Installation of MySQL on one's personal computer (part of the 2024 Compute Ontario Summer School) Virtual | COSS2024![Show in Google map](https://www.scinethpc.ca/wp-content/plugins/amr-ical-events-list/images/map_16.png) |
21 Jun 1:30 pm 4:30 pmBioinformatics, the interdisciplinary field at the intersection of biology and computational science, has revolutionized our understanding of life processes. In this one-day course, we will first tune your HPC knowledge/skills towards bioinformatics computing. Then a typical metagenomics pipeline will be explored to introduce common tools used in bioinformatic analysis and to show how they can be run in an HPC environment. Join us for an immersive day of hands-on exploration in the captivating world of bioinformatics and metagenomics! Level: Introductory Length: Two 3-Hour Sessions Format: Lecture + Hands-on Prerequisites: Alliance Account Basic understanding of biology and familiarity with Unix shells (e.g. bash, zsh, etc.). (part of the 2024 Compute Ontario Summer School) Virtual | COSS2024![Show in Google map](https://www.scinethpc.ca/wp-content/plugins/amr-ical-events-list/images/map_16.png) |